Index

B

box() (in module dtne.utils)

box_kernel() (in module dtne.utils) box_kernel2() (in module dtne.utils)

C

calc_l() (in module dtne.utils) classic() (in module dtne.utils) cluster_cells() (dtne.embedding.DTNE method)

compute_embedding() (dtne.embedding.DTNE method) compute_infty_R() (in module dtne.utils) compute_landmark_operator() (in module dtne.utils) compute_markov_matrix() (dtne.embedding.DTNE method)

D

DTNE (class in dtne.embedding) dtne.embedding module

dtne.utils module

E

eigen_kernel() (in module dtne.utils)

eigen_kernel2() (in module dtne.utils) epanechnikov() (in module dtne.utils)

F

fit() (dtne.embedding.DTNE method)

fit_transform() (dtne.embedding.DTNE method)

G

gauss() (in module dtne.utils)

gauss_kernel() (in module dtne.utils)

L

learn_vectors() (dtne.embedding.DTNE method)

M

mix_decay() (in module dtne.utils) mix_kernel() (in module dtne.utils)

module dtne.embedding dtne.utils

O

order_cells() (dtne.embedding.DTNE method)

P

phate_kernel() (in module dtne.utils)

S

scanpy_kernel() (in module dtne.utils)